MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Mammaliicoccus sciuri
ACT.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 62
bases: 2,736,455 bps
CDS: 2,710
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 59
misc RNA:
Total features: 2,779
Total number of protein coding genes annotated/found:
2,710
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5014|JADGMB010000036.1
SEQF5014_00984
Genome Viewer
NA
AA
954/318
335944-334991
hypothetical protein
SEQF5014|JADGMB010000036.1
SEQF5014_00983
Genome Viewer
NA
AA
516/172
334408-333893
hypothetical protein
SEQF5014|JADGMB010000036.1
SEQF5014_00982
Genome Viewer
NA
AA
1443/481
331479-332921
Aryl-phospho-beta-D-glucosidase BglA
SEQF5014|JADGMB010000036.1
SEQF5014_00981
Genome Viewer
NA
AA
1890/630
329576-331465
PTS system beta-glucoside-specific EIIBCA component
SEQF5014|JADGMB010000036.1
SEQF5014_00980
Genome Viewer
NA
AA
702/234
329421-328720
putative HTH-type transcriptional regulator YydK
SEQF5014|JADGMB010000036.1
SEQF5014_00979
Genome Viewer
NA
AA
591/197
328088-328678
Putative phosphoserine phosphatase 2
SEQF5014|JADGMB010000036.1
SEQF5014_00978
Genome Viewer
NA
AA
636/212
327916-327281
FMN-dependent NADH-azoreductase 2
SEQF5014|JADGMB010000036.1
SEQF5014_00977
Genome Viewer
NA
AA
1539/513
326888-325350
Trifunctional nucleotide phosphoesterase protein YfkN
SEQF5014|JADGMB010000036.1
SEQF5014_00976
Genome Viewer
NA
AA
963/321
325090-324128
Phosphate-import protein PhnD
SEQF5014|JADGMB010000036.1
SEQF5014_00975
Genome Viewer
NA
AA
774/258
324057-323284
Phosphate-import ATP-binding protein PhnC
SEQF5014|JADGMB010000036.1
SEQF5014_00974
Genome Viewer
NA
AA
798/266
323283-322486
Phosphate-import permease protein PhnE
SEQF5014|JADGMB010000036.1
SEQF5014_00973
Genome Viewer
NA
AA
810/270
322489-321680
hypothetical protein
SEQF5014|JADGMB010000036.1
SEQF5014_00972
Genome Viewer
NA
AA
849/283
321465-320617
N-acyl homoserine lactonase AiiB
SEQF5014|JADGMB010000036.1
SEQF5014_00971
Genome Viewer
NA
AA
1134/378
320591-319458
Putative alcohol dehydrogenase D
SEQF5014|JADGMB010000036.1
SEQF5014_00970
Genome Viewer
NA
AA
1284/428
319108-317825
Kynureninase
SEQF5014|JADGMB010000036.1
SEQF5014_00969
Genome Viewer
NA
AA
378/126
317797-317420
hypothetical protein
SEQF5014|JADGMB010000036.1
SEQF5014_00968
Genome Viewer
NA
AA
702/234
316667-317368
Antiholin-like protein LrgB
SEQF5014|JADGMB010000036.1
SEQF5014_00967
Genome Viewer
NA
AA
417/139
316254-316670
Antiholin-like protein LrgA
SEQF5014|JADGMB010000036.1
SEQF5014_00966
Genome Viewer
NA
AA
723/241
315411-316133
Sensory transduction protein LytR
SEQF5014|JADGMB010000036.1
SEQF5014_00965
Genome Viewer
NA
AA
1755/585
313657-315411
Sensor histidine kinase YpdA
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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